[{"data":1,"prerenderedAt":-1},["ShallowReactive",2],{"doc-detail-187455-en":3,"doc-seo-187455-105":30,"detail-sidebar-cat-1-en-105":91},{"code":4,"msg":5,"data":6},0,"success",{"doc_id":7,"user_id":8,"nickname":9,"user_avatar":10,"doc_module":11,"category_id":12,"category_name":13,"doc_title":14,"doc_description":15,"doc_content":16,"file_id":17,"file_url":18,"file_type":19,"file_size":20,"view_count":4,"is_deleted":4,"is_public":11,"is_downloadable":11,"audit_status":11,"page_count":21,"language":22,"language_code":23,"site_id":24,"html_lang":23,"table_of_contents":25,"faqs":26,"seo_title":27,"seo_description":15,"update_tm":28,"read_time":29},187455,1099523885074,"Riley West","https://ap-avatar.wpscdn.com/davatar_9964176cb1d06d4a9deccf72a44ae3dc",1,158,"General","FernandoEtAl09","This document presents a detailed analysis of PQS density and the proportion of genes with PQS across different regions relative to genes, categorizing data by gene type (all, coding, template) and differential expression status (all, up-regulated, down-regulated). The data indicates variations in PQS density and proportion, with specific trends observed in the promoter region, beginning of the gene, end of the gene, and after the gene. For instance, PQS density per kb is highest in the promoter region for all gene types and differentially expressed genes, while the proportion of genes with PQS also shows notable concentrations in the promoter and beginning of gene regions. The document includes visual representations of these trends, likely in the form of graphs, to illustrate the complex relationships between gene regions, gene types, and PQS characteristics. The research methodology likely involves computational analysis of genomic data to identify and quantify PQS and their correlation with gene expression and structure. This study contributes to the understanding of the functional roles of PQS in gene regulation and expression patterns within different genomic contexts.","|  | Gene type\u003Cbr>Strand | All genes |  |  | Differentially expressed genes |  |  | Upregulated genes |  |  | Downregulated genes |  |  |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n|  |  | Both | Coding | Template | Both | Coding | Template | Both | Coding | Template | Both | Coding | Template |\n| PQS density | Promoter region | 1.48 | 0.74 | 0.74 | 1.81 | 0.90 | 0.91 | 1.98 | 1.03 | 0.95 | 1.61 | 0.75 | 0.86 |\n| (\\# per kb) | Beginning of the gene | 0.99 | 0.57 | 0.42 | 1.32 | 0.72 | 0.60 | 1.40 | 0.76 | 0.64 | 1.23 | 0.68 | 0.55 |\n|  | End of the gene | 0.18 | 0.08 | 0.10 | 0.28 | 0.10 | 0.19 | 0.42 | 0.14 | 0.28 | 0.11 | 0.04 | 0.08 |\n|  | After the gene | 0.30 | 0.21 | 0.09 | 0.50 | 0.39 | 0.11 | 0.50 | 0.37 | 0.13 | 0.49 | 0.42 | 0.08 |\n| Proportion | Promoter region | 24.2 | 12.9 | 12.9 | 29.2 | 15.5 | 15.5 | 31.5 | 17.0 | 16.8 | 26.5 | 13.7 | 14.0 |\n| of genes | Beginning of the gene | 17.7 | 10.6 | 7.8 | 23.0 | 13.1 | 11.1 | 24.3 | 13.6 | 11.8 | 21.5 | 12.5 | 10.2 |\n| with a | End of the gene | 1.8 | 0.8 | 1.0 | 2.8 | 1.0 | 1.9 | 4.1 | 1.4 | 2.8 | 1.1 | 0.4 | 0.8 |\n| PQS (%) | After the gene | 2.9 | 2.1 | 0.9 | 4.9 | 3.9 | 1.1 | 5.0 | 3.7 | 1.3 | 4.8 | 4.0 | 0.8 |\n\n| \u003Cbr>\u003Cbr>\u003Cbr>\u003Cbr>\u003Cbr>   promoter | \u003Cbr>gene beginning |\n| --- | --- |\n\n| \u003Cbr>\u003Cbr>\u003Cbr>\u003Cbr>\u003Cbr>   promoter | \u003Cbr>gene beginning |\n| --- | --- |","cbCaihJHMvflc3Mm","https://ap.wps.com/l/cbCaihJHMvflc3Mm","pdf",173059,7,"English","en",105,"# PQS density\n## Promoter region\n## Beginning of the gene\n## End of the gene\n## After the gene\n# Proportion of genes with a PQS (%)","[{\"question\":\"What does PQS density refer to in this document?\",\"answer\":\"PQS density refers to the number of PQS (presumably a type of DNA structure or sequence) per kilobase in specific genomic regions relative to genes.\"},{\"question\":\"How does PQS density vary across different gene types and expression statuses?\",\"answer\":\"The document shows that PQS density varies, with higher densities observed in the promoter and beginning of the gene regions for all gene types and differentially expressed genes. Specifically, up-regulated genes also show increased PQS density in these regions compared to down-regulated genes.\"},{\"question\":\"What is the significance of the data presented regarding the proportion of genes with PQS?\",\"answer\":\"The data indicates that a certain percentage of genes possess PQS, with the highest proportions found in the promoter and beginning of the gene regions. This suggests a potential correlation between the presence of PQS and the regulatory or functional elements of genes.\"}]","FernandoEtAl09 | PDF",1788383120,3,{"code":4,"msg":31,"data":32},"ok",{"site_id":24,"language":23,"slug":33,"title":14,"keywords":34,"description":15,"schema_data":35,"social_meta":86,"head_meta":88,"extra_data":90,"updated_unix":28},"fernandoetal09","",{"@graph":36,"@context":85},[37,53,68],{"@type":38,"itemListElement":39},"BreadcrumbList",[40,44,48,50],{"item":41,"name":42,"@type":43,"position":11},"https://docshare.wps.com","Home","ListItem",{"item":45,"name":46,"@type":43,"position":47},"https://docshare.wps.com/template/","Template",2,{"item":49,"name":13,"@type":43,"position":29},"https://docshare.wps.com/template/general/",{"item":51,"name":14,"@type":43,"position":52},"https://docshare.wps.com/template/fernandoetal09/187455/",4,{"url":51,"name":14,"@type":54,"author":55,"headline":14,"publisher":57,"fileFormat":60,"inLanguage":23,"description":15,"dateModified":61,"datePublished":62,"encodingFormat":60,"isAccessibleForFree":63,"interactionStatistic":64},"DigitalDocument",{"name":9,"@type":56},"Person",{"url":41,"name":58,"@type":59},"DocShare","Organization","application/pdf","2026-09-04","2026-09-02",true,{"@type":65,"interactionType":66,"userInteractionCount":11},"InteractionCounter",{"@type":67},"ViewAction",{"@type":69,"mainEntity":70},"FAQPage",[71,77,81],{"name":72,"@type":73,"acceptedAnswer":74},"What does PQS density refer to in this document?","Question",{"text":75,"@type":76},"PQS density refers to the number of PQS (presumably a type of DNA structure or sequence) per kilobase in specific genomic regions relative to genes.","Answer",{"name":78,"@type":73,"acceptedAnswer":79},"How does PQS density vary across different gene types and expression statuses?",{"text":80,"@type":76},"The document shows that PQS density varies, with higher densities observed in the promoter and beginning of the gene regions for all gene types and differentially expressed genes. Specifically, up-regulated genes also show increased PQS density in these regions compared to down-regulated genes.",{"name":82,"@type":73,"acceptedAnswer":83},"What is the significance of the data presented regarding the proportion of genes with PQS?",{"text":84,"@type":76},"The data indicates that a certain percentage of genes possess PQS, with the highest proportions found in the promoter and beginning of the gene regions. This suggests a potential correlation between the presence of PQS and the regulatory or functional elements of genes.","https://schema.org",{"og:url":51,"og:type":87,"og:title":14,"og:site_name":58,"og:description":15},"article",{"robots":89,"canonical":51},"index,follow",{"doc_id":7,"site_id":24},{"code":4,"msg":5,"data":92},[93,98,103,108,113,118,123,128,133],{"id":94,"doc_module":11,"doc_module_name":46,"category_name":95,"show_sort_weight":96,"slug":97},11,"Presentations",90,"presentations",{"id":99,"doc_module":11,"doc_module_name":46,"category_name":100,"show_sort_weight":101,"slug":102},12,"Resumes",80,"resumes",{"id":104,"doc_module":11,"doc_module_name":46,"category_name":105,"show_sort_weight":106,"slug":107},14,"Invoices",70,"invoices",{"id":109,"doc_module":11,"doc_module_name":46,"category_name":110,"show_sort_weight":111,"slug":112},15,"Posters",60,"posters",{"id":114,"doc_module":11,"doc_module_name":46,"category_name":115,"show_sort_weight":116,"slug":117},16,"Social Media",50,"social-media",{"id":119,"doc_module":11,"doc_module_name":46,"category_name":120,"show_sort_weight":121,"slug":122},17,"Forms",40,"forms",{"id":124,"doc_module":11,"doc_module_name":46,"category_name":125,"show_sort_weight":126,"slug":127},18,"Letters",30,"letters",{"id":129,"doc_module":11,"doc_module_name":46,"category_name":130,"show_sort_weight":131,"slug":132},21,"Paper Templates",5,"papers-templates",{"id":12,"doc_module":11,"doc_module_name":46,"category_name":13,"show_sort_weight":4,"slug":134},"general-158"]